public class DecisionMaker
extends java.lang.Object
Modifier and Type | Field and Description |
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static int |
NUM_OF_RUNS |
Constructor and Description |
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DecisionMaker(TreeFactory factory)
Creates new DecisionMaker
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Modifier and Type | Method and Description |
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java.util.List<ValidationClassificationResult> |
getBestClasspath(edu.msu.cme.rdp.readseq.utils.orientation.GoodWordIterator iterator,
java.util.HashMap<java.lang.String,HierarchyTree> nodeMap,
boolean useSeed,
int min_bootstrap_words)
For each sequence, find the best class among the list of genera using all the overlapping words.
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public static final int NUM_OF_RUNS
public DecisionMaker(TreeFactory factory)
public java.util.List<ValidationClassificationResult> getBestClasspath(edu.msu.cme.rdp.readseq.utils.orientation.GoodWordIterator iterator, java.util.HashMap<java.lang.String,HierarchyTree> nodeMap, boolean useSeed, int min_bootstrap_words) throws java.io.IOException
java.io.IOException