public class Reprocess
extends java.lang.Object
Constructor and Description |
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Reprocess() |
Modifier and Type | Method and Description |
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static void |
main(java.lang.String[] args)
This class reprocesses the classification results (allrank output) and print out hierarchy output file, based on the confidence cutoff;
and print out only the detail classification results with assignment at certain rank with confidence above the cutoff or/and matching a given taxon.
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static java.util.HashSet<java.lang.String> |
readTaxonFilterFile(java.lang.String file) |
public static java.util.HashSet<java.lang.String> readTaxonFilterFile(java.lang.String file) throws java.io.IOException
java.io.IOException
public static void main(java.lang.String[] args) throws java.lang.Exception
args
- java.lang.Exception