public class ValidClassificationResultFacade
extends java.lang.Object
Constructor and Description |
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ValidClassificationResultFacade(LineageSequence seq,
java.util.List<ValidationClassificationResult> assignment)
Creates a new instance of ClassificationResultFacade
|
Modifier and Type | Method and Description |
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java.util.List<java.lang.String> |
getAncestors() |
HierarchyTree |
getLabeledNode() |
java.lang.String |
getPath()
print the labeled path and the assigned path
Note: the true path is list of string of ancestors for a sequence,
the assigned path is a list of ClassificationResult for a sequence.
|
java.util.List<ValidationClassificationResult> |
getRankAssignment() |
java.lang.String |
getSeqName() |
boolean |
isMissed() |
void |
setLabeledNode(HierarchyTree n) |
void |
setMissedRank(java.lang.String missedRank) |
public ValidClassificationResultFacade(LineageSequence seq, java.util.List<ValidationClassificationResult> assignment)
public java.lang.String getSeqName()
public java.util.List<java.lang.String> getAncestors()
public java.util.List<ValidationClassificationResult> getRankAssignment()
public boolean isMissed()
public void setMissedRank(java.lang.String missedRank)
public HierarchyTree getLabeledNode()
public void setLabeledNode(HierarchyTree n)
public java.lang.String getPath() throws java.io.IOException
java.io.IOException